PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100182390011
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family G2-like
Protein Properties Length: 309aa    MW: 34816.2 Da    PI: 9.7334
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100182390011genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1031.9e-3265118255
                       G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   prlrWtpeLH +Fv+ave+LGG+ekAtPk +l+lm+vkgL+++hvkSHLQ+YR+
  Ote100182390011|100182390011  65 PRLRWTPELHLCFVHAVERLGGEEKATPKLVLQLMNVKGLSIAHVKSHLQMYRS 118
                                   8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.6E-3161119IPR009057Homeodomain-like
PROSITE profilePS5129412.85261121IPR017930Myb domain
SuperFamilySSF466899.32E-1662119IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-2365120IPR006447Myb domain, plants
PfamPF002497.6E-1066117IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MQRATNSEVD EDMENNTKKE IEGEGEENES KAMNENSSSN STVEENNGKK ASSGSVRQYV  60
RSKTPRLRWT PELHLCFVHA VERLGGEEKA TPKLVLQLMN VKGLSIAHVK SHLQMYRSKK  120
IDDPSEVISQ QRLLIDAGDR HIYNLSQLPM LQSFNQLSPV SSLRFRDAFL PSSLINNPHE  180
INNMYLSRAS SKFLENDRIN LMNQRFWQTR QTATNTINHH LAASKAQETP IFKEGRSTLK  240
RKLNSDVNLD LNLSLKTTTP SKEKKMKTDH QEVDSSLSLS LFSTPKENIH GGVRKNPGGM  300
GSGSLDLSL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076824.17e-96PREDICTED: uncharacterized protein LOC105160975
TrEMBLA0A068UZK85e-74A0A068UZK8_COFCA; Uncharacterized protein
STRINGPOPTR_0016s12940.12e-63(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA85732129